Date: Mon, 24 Apr 2017 15:52:50 +0200
From: Arne Elofsson <arne@bioinfo.se>
To: Andreas Tille <andreas@an3as.eu>
Subject: Re: [andreas@an3as.eu: Missing source for modhmm]

modhmm.org was closed 5 years ago (and Håkan left science 10 years ago).

You can find one later source of modhmm under
https://github.com/ElofssonLab/TOPCONS2. I would guess that it still works
with psortb but you need to test it...


Yours

Arne

-----------------------------------------
  Arne Elofsson                  Science for Life Laboratory
  Tel:+46-(0)70 695 1045   Stockholm University
  http://bioinfo.se/               Box 1031,
  Email: arne@bioinfo.se   17121 Solna, Sweden
  Twitter:   https://twitter.com/arneelof
  Scholar: http://scholar.google.se/citations?user=3Ds3OCM3AAAAAJ
  ORCID: 0000-0002-7115-9751



Date: Mon, 24 Apr 2017 16:46:01 +0200
From: Erik Sjölund <erik.sjolund@gmail.com>
Cc: Håkan Viklund <hakanv@sbc.su.se>, Debian Med Project List <debian-med@lists.debian.org>, Arne Elofsson <arne@bioinfo.se>
Subject: Re: Missing source for modhmm

Hi,
The DNS domain modhmm.org has been canceled.

Håkan Viklund quit 2009 so I instead asked his supervisor Arne Elofsson.
He thought the latest version of modhmm can be found here:

https://github.com/ElofssonLab/TOPCONS2/tree/master/topcons2_webserver/predictors/source/modhmm

I also see there is some source code here (from 2009):
https://sourceforge.net/projects/modhmm/files/modhmm/1.1.0/

Best regards,
Erik Sjölund

On Mon, Apr 24, 2017 at 1:51 PM, Andreas Tille <andreas@an3as.eu> wrote:
> Hi Håkan,
>
> I'm writing you on behalf of the Debian Med team which is a group inside
> Debian with the objective to package free software that is relevant in
> life sciences and medicine for official Debian.  I intended to package
> psortb[1] which contains a copy of modhmm version 0.92.  Usually the
> goal for packaging is to package code of external libraries as an extra
> package and thus I was checking your home page[2] to find the location
> of the modhmm code.  Unfortunately the linked page
> http://www.modhmm.org/ seems not to be available.
>
> Is there any other location to download a current version of modhmm?
>
> Kind regards and thanks for providing modhmm as free software
>
>        Andreas.
>
>
> [1] http://www.psort.org/
> [2] http://www.sbc.su.se/~hakanv/


