A B C D E F G H I L M N O Q R S T U

## A

AbstractRead - Class in artificialFastqGenerator
AbstractRead() - Constructor for class artificialFastqGenerator.AbstractRead
addCoveringRead(Read) - Method in class artificialFastqGenerator.Nucleobase
  Add a read to the list of reads which cover this nucleobase.
analyzeHumanReferenceGenome(String, String, int) - Static method in class artificialFastqGenerator.Genomes
  Conduct an analysis of the human reference genome.
ArtificialFastqGenerationUtils - Class in artificialFastqGenerator
  ArtificialFastqGenerationUtils consists exclusively of static utility methods that are used in artificial fastq generation.
ArtificialFastqGenerationUtils() - Constructor for class artificialFastqGenerator.ArtificialFastqGenerationUtils
artificialFastqGenerator - package artificialFastqGenerator
ArtificialFastqGenerator - Class in artificialFastqGenerator
  An instance of this class can be used to generate artificial FASTQ files from the human reference genome.
ArtificialFastqGenerator() - Constructor for class artificialFastqGenerator.ArtificialFastqGenerator
ArtificialFastqGenerator.BabyRead - Class in artificialFastqGenerator
  A sequence of nucleobases which may be used to create a read.
ArtificialFastqGenerator.BabyRead(int, int) - Constructor for class artificialFastqGenerator.ArtificialFastqGenerator.BabyRead

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