% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/geom-crossbar.R, R/geom-errorbar.R,
%   R/geom-linerange.R, R/geom-pointrange.R
\name{geom_crossbar}
\alias{geom_crossbar}
\alias{geom_errorbar}
\alias{geom_linerange}
\alias{geom_pointrange}
\title{Vertical intervals: lines, crossbars & errorbars}
\usage{
geom_crossbar(
  mapping = NULL,
  data = NULL,
  stat = "identity",
  position = "identity",
  ...,
  fatten = 2.5,
  na.rm = FALSE,
  orientation = NA,
  show.legend = NA,
  inherit.aes = TRUE
)

geom_errorbar(
  mapping = NULL,
  data = NULL,
  stat = "identity",
  position = "identity",
  ...,
  na.rm = FALSE,
  orientation = NA,
  show.legend = NA,
  inherit.aes = TRUE
)

geom_linerange(
  mapping = NULL,
  data = NULL,
  stat = "identity",
  position = "identity",
  ...,
  na.rm = FALSE,
  orientation = NA,
  show.legend = NA,
  inherit.aes = TRUE
)

geom_pointrange(
  mapping = NULL,
  data = NULL,
  stat = "identity",
  position = "identity",
  ...,
  fatten = 4,
  na.rm = FALSE,
  orientation = NA,
  show.legend = NA,
  inherit.aes = TRUE
)
}
\arguments{
\item{mapping}{Set of aesthetic mappings created by \code{\link[=aes]{aes()}}. If specified and
\code{inherit.aes = TRUE} (the default), it is combined with the default mapping
at the top level of the plot. You must supply \code{mapping} if there is no plot
mapping.}

\item{data}{The data to be displayed in this layer. There are three
options:

If \code{NULL}, the default, the data is inherited from the plot
data as specified in the call to \code{\link[=ggplot]{ggplot()}}.

A \code{data.frame}, or other object, will override the plot
data. All objects will be fortified to produce a data frame. See
\code{\link[=fortify]{fortify()}} for which variables will be created.

A \code{function} will be called with a single argument,
the plot data. The return value must be a \code{data.frame}, and
will be used as the layer data. A \code{function} can be created
from a \code{formula} (e.g. \code{~ head(.x, 10)}).}

\item{stat}{The statistical transformation to use on the data for this
layer, either as a \code{ggproto} \code{Geom} subclass or as a string naming the
stat stripped of the \code{stat_} prefix (e.g. \code{"count"} rather than
\code{"stat_count"})}

\item{position}{Position adjustment, either as a string naming the adjustment
(e.g. \code{"jitter"} to use \code{position_jitter}), or the result of a call to a
position adjustment function. Use the latter if you need to change the
settings of the adjustment.}

\item{...}{Other arguments passed on to \code{\link[=layer]{layer()}}. These are
often aesthetics, used to set an aesthetic to a fixed value, like
\code{colour = "red"} or \code{size = 3}. They may also be parameters
to the paired geom/stat.}

\item{fatten}{A multiplicative factor used to increase the size of the
middle bar in \code{geom_crossbar()} and the middle point in
\code{geom_pointrange()}.}

\item{na.rm}{If \code{FALSE}, the default, missing values are removed with
a warning. If \code{TRUE}, missing values are silently removed.}

\item{orientation}{The orientation of the layer. The default (\code{NA})
automatically determines the orientation from the aesthetic mapping. In the
rare event that this fails it can be given explicitly by setting \code{orientation}
to either \code{"x"} or \code{"y"}. See the \emph{Orientation} section for more detail.}

\item{show.legend}{logical. Should this layer be included in the legends?
\code{NA}, the default, includes if any aesthetics are mapped.
\code{FALSE} never includes, and \code{TRUE} always includes.
It can also be a named logical vector to finely select the aesthetics to
display.}

\item{inherit.aes}{If \code{FALSE}, overrides the default aesthetics,
rather than combining with them. This is most useful for helper functions
that define both data and aesthetics and shouldn't inherit behaviour from
the default plot specification, e.g. \code{\link[=borders]{borders()}}.}
}
\description{
Various ways of representing a vertical interval defined by \code{x},
\code{ymin} and \code{ymax}. Each case draws a single graphical object.
}
\section{Orientation}{

This geom treats each axis differently and, thus, can thus have two orientations. Often the orientation is easy to deduce from a combination of the given mappings and the types of positional scales in use. Thus, ggplot2 will by default try to guess which orientation the layer should have. Under rare circumstances, the orientation is ambiguous and guessing may fail. In that case the orientation can be specified directly using the \code{orientation} parameter, which can be either \code{"x"} or \code{"y"}. The value gives the axis that the geom should run along, \code{"x"} being the default orientation you would expect for the geom.
}

\section{Aesthetics}{

\code{geom_linerange()} understands the following aesthetics (required aesthetics are in bold):
\itemize{
\item \strong{\code{x} \emph{or} \code{y}}
\item \strong{\code{ymin} \emph{or} \code{xmin}}
\item \strong{\code{ymax} \emph{or} \code{xmax}}
\item \code{alpha}
\item \code{colour}
\item \code{group}
\item \code{linetype}
\item \code{linewidth}
}
Note that \code{geom_pointrange()} also understands \code{size} for the size of the points.

Learn more about setting these aesthetics in \code{vignette("ggplot2-specs")}.
}

\examples{
# Create a simple example dataset
df <- data.frame(
  trt = factor(c(1, 1, 2, 2)),
  resp = c(1, 5, 3, 4),
  group = factor(c(1, 2, 1, 2)),
  upper = c(1.1, 5.3, 3.3, 4.2),
  lower = c(0.8, 4.6, 2.4, 3.6)
)

p <- ggplot(df, aes(trt, resp, colour = group))
p + geom_linerange(aes(ymin = lower, ymax = upper))
p + geom_pointrange(aes(ymin = lower, ymax = upper))
p + geom_crossbar(aes(ymin = lower, ymax = upper), width = 0.2)
p + geom_errorbar(aes(ymin = lower, ymax = upper), width = 0.2)

# Flip the orientation by changing mapping
ggplot(df, aes(resp, trt, colour = group)) +
  geom_linerange(aes(xmin = lower, xmax = upper))

# Draw lines connecting group means
p +
  geom_line(aes(group = group)) +
  geom_errorbar(aes(ymin = lower, ymax = upper), width = 0.2)

# If you want to dodge bars and errorbars, you need to manually
# specify the dodge width
p <- ggplot(df, aes(trt, resp, fill = group))
p +
 geom_col(position = "dodge") +
 geom_errorbar(aes(ymin = lower, ymax = upper), position = "dodge", width = 0.25)

# Because the bars and errorbars have different widths
# we need to specify how wide the objects we are dodging are
dodge <- position_dodge(width=0.9)
p +
  geom_col(position = dodge) +
  geom_errorbar(aes(ymin = lower, ymax = upper), position = dodge, width = 0.25)

# When using geom_errorbar() with position_dodge2(), extra padding will be
# needed between the error bars to keep them aligned with the bars.
p +
geom_col(position = "dodge2") +
geom_errorbar(
  aes(ymin = lower, ymax = upper),
  position = position_dodge2(width = 0.5, padding = 0.5)
)
}
\seealso{
\code{\link[=stat_summary]{stat_summary()}} for examples of these guys in use,
\code{\link[=geom_smooth]{geom_smooth()}} for continuous analogue,
\code{\link[=geom_errorbarh]{geom_errorbarh()}} for a horizontal error bar.
}
